AT2G40220 (ABI4, SAN5, SIS5,...)


Aliases : ABI4, SAN5, SIS5, ATABI4, SUN6, ISI3, GIN6

Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G40220
Cluster HCCA cluster: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.03 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.03 Gene family
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.03 Gene family
Cre08.g364400 No alias No description available 0.03 Gene family
GSVIVT01014291001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01017315001 No alias No description available 0.02 Gene family
GSVIVT01022076001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01026334001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os02g10760 Os02g0202000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os04g46240 Os04g0547500 No description available 0.04 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g28350 Os05g0351200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.05 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_24801g0010 No alias No description available 0.02 Gene family
MA_27309g0010 No alias No description available 0.02 Gene family
MA_3405g0010 No alias No description available 0.02 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_54341g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_99821g0010 No alias No description available 0.03 Gene family
Solyc03g006320.1.1 Solyc03g006320.1 No description available 0.02 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.03 Gene family
Solyc03g093550.1.1 Solyc03g093550.1 No description available 0.03 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.03 Gene family
Solyc04g050750.1.1 Solyc04g050750.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc08g008305.1.1 Solyc08g008305.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc09g066360.1.1 Solyc09g066360.1 No description available 0.02 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.03 Gene family
Zm00001d009573 GRMZM2G021790 No description available 0.02 Gene family
Zm00001d017466 GRMZM2G057386 No description available 0.02 Gene family
Zm00001d020267 GRMZM2G141679 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.03 Gene family
Zm00001d024436 GRMZM2G055070 No description available 0.03 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d030862 GRMZM2G039112 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.02 Gene family
Zm00001d035835 GRMZM2G135452 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d036298 GRMZM2G119865 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d036889 GRMZM2G106591 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d045262 GRMZM2G429378 No description available 0.02 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Arabidopsis.org
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0005983 starch catabolic process NAS Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
BP GO:0006970 response to osmotic stress IMP Arabidopsis.org
BP GO:0009414 response to water deprivation IMP Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
BP GO:0009737 response to abscisic acid RCA Arabidopsis.org
BP GO:0009738 abscisic acid-activated signaling pathway IMP Arabidopsis.org
BP GO:0009744 response to sucrose IEP Arabidopsis.org
BP GO:0009747 hexokinase-dependent signaling NAS Arabidopsis.org
BP GO:0009749 response to glucose IMP Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy RCA Arabidopsis.org
BP GO:0009845 seed germination RCA Arabidopsis.org
BP GO:0009909 regulation of flower development RCA Arabidopsis.org
BP GO:0009933 meristem structural organization RCA Arabidopsis.org
BP GO:0010162 seed dormancy process RCA Arabidopsis.org
BP GO:0010182 sugar mediated signaling pathway RCA Arabidopsis.org
BP GO:0010182 sugar mediated signaling pathway TAS Arabidopsis.org
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Arabidopsis.org
BP GO:0010353 response to trehalose IMP Arabidopsis.org
BP GO:0010353 response to trehalose IEP Arabidopsis.org
BP GO:0010449 root meristem growth IMP Arabidopsis.org
BP GO:0010896 regulation of triglyceride catabolic process IMP Arabidopsis.org
BP GO:0016567 protein ubiquitination RCA Arabidopsis.org
BP GO:0019915 lipid storage RCA Arabidopsis.org
BP GO:0031930 mitochondria-nucleus signaling pathway IDA Arabidopsis.org
BP GO:0031930 mitochondria-nucleus signaling pathway IMP Arabidopsis.org
BP GO:0032880 regulation of protein localization IDA Arabidopsis.org
MF GO:0043565 sequence-specific DNA binding IPI Arabidopsis.org
MF GO:0044212 transcription regulatory region DNA binding IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Arabidopsis.org
BP GO:0048316 seed development IMP Arabidopsis.org
BP GO:0048527 lateral root development IMP Arabidopsis.org
BP GO:0050826 response to freezing RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 54 103
No external refs found!