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  5. Nbi_g18714

Nbi_g18714 (EMB2271)


Aliases : EMB2271

Description : SSU processome assembly factor *(RRP9/YAO1) & original description: none


Gene families : OG0006246 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18714

Target Alias Description ECC score Gene Family Method Actions
AT4G05410 YAO Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.21 EMB2271 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Cre06.g278175 EMB2271 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 348 383
IPR001680 WD40_repeat 235 260
IPR001680 WD40_repeat 265 302
IPR001680 WD40_repeat 310 343
No external refs found!