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  5. Nbi_g18642

Nbi_g18642


Description : not classified & original description: none


Gene families : OG0001647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18642

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00055640 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00013870 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Ala_g22559 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13144 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g01835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33023 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g00903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012680001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01017668001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01020110001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_00323 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g30218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_104588g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02716 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g63132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56941 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002364_P001 Zm00001e002364 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030247 polysaccharide binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025287 WAK_GUB 36 95
No external refs found!