1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g18621

Nbi_g18621


Description : regulatory component *(RPN11) of 26S proteasome & original description: none


Gene families : OG0003199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003199_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18621
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AT5G23540 No alias Mov34/MPN/PAD-1 family protein 0.07 OrthoFinder output from all 47 species
Adi_g086661 No alias regulatory component *(RPN11) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Aev_g41509 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ala_g01408 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Als_g12198 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g01609 No alias regulatory component *(RPN11) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Ceric.06G045400.1 Ceric.06G045400 regulatory component *(RPN11) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.22 No alias Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
Cre01.g011500 No alias Protein degradation.26S proteasome.regulatory... 0.1 OrthoFinder output from all 47 species
Dac_g03686 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dcu_g00902 No alias regulatory component *(RPN11) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Ehy_g11947 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009529001 No alias Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
LOC_Os01g16190.1 LOC_Os01g16190 regulatory component RPN11 of 26S proteasome 0.12 OrthoFinder output from all 47 species
Len_g05256 No alias regulatory component *(RPN11) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
MA_10428869g0010 No alias regulatory component RPN11 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp5g01180.1 No alias regulatory component RPN11 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Ppi_g05003 No alias regulatory component *(RPN11) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Sam_g07998 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo271544 No alias Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Solyc04g079200.3.1 Solyc04g079200 regulatory component RPN11 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Spa_g21858 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g01686 No alias regulatory component *(RPN11) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 62 173
IPR024969 Rpn11/EIF3F_C 208 330
No external refs found!