AT1G13290 (WIP6, DOT5)


Aliases : WIP6, DOT5

Description : C2H2-like zinc finger protein


Gene families : OG_01_0000935 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000935_tree ,
OG_02_0000679 (LandPlants) Phylogenetic Tree(s): OG_02_0000679_tree ,
OG_03_0000528 (SeedPlants) Phylogenetic Tree(s): OG_03_0000528_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13290
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00164790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AMTR_s00114p00100630 evm_27.TU.AmTr_v1... Zinc finger protein WIP3 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01011943001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01032076001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.09 Archaeplastida
GSVIVT01033329001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_21793 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os09g13680.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_97533g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c15_17790V3.1 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
Solyc04g074320.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g074360.4.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e003504_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e009663_P001 No alias C2H2 zinc finger transcription factor 0.12 Archaeplastida
Zm00001e024373_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e026959_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
GSVIVT01011943001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 LandPlants
GSVIVT01032076001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 LandPlants
GSVIVT01033329001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
LOC_Os09g13680.1 No alias C2H2 zinc finger transcription factor 0.05 LandPlants
Solyc04g074320.3.1 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e003504_P001 No alias C2H2 zinc finger transcription factor 0.05 LandPlants
Zm00001e009663_P001 No alias C2H2 zinc finger transcription factor 0.1 LandPlants
Zm00001e024373_P001 No alias C2H2 zinc finger transcription factor 0.05 LandPlants
Zm00001e026959_P001 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
AMTR_s00022p00243980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 SeedPlants
GSVIVT01011943001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 SeedPlants
GSVIVT01032076001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 SeedPlants
LOC_Os09g13680.1 No alias C2H2 zinc finger transcription factor 0.05 SeedPlants
MA_3555g0010 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants
Zm00001e003504_P001 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants
Zm00001e024373_P001 No alias C2H2 zinc finger transcription factor 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010087 phloem or xylem histogenesis IMP Interproscan
BP GO:0010305 leaf vascular tissue pattern formation IMP Interproscan
BP GO:0010588 cotyledon vascular tissue pattern formation IMP Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0048367 shoot system development IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!