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  5. Nbi_g18568

Nbi_g18568


Description : 3-dehydroquinate synthase *(DHQS) & original description: none


Gene families : OG0009076 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0009076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18568
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene32664.t1 Aspi01Gene32664 3-dehydroquinate synthase *(DHQS) & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g07035 No alias 3-dehydroquinate synthase *(DHQS) & original description: none 0.05 OrthoFinder output from all 39 species
Ppi_g10339 No alias 3-dehydroquinate synthase *(DHQS) & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g39655 No alias 3-dehydroquinate synthase *(DHQS) & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR030960 DHQS/DOIS 193 445
No external refs found!