Cre03.g196850


Description : 27.2 RNA.transcription Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant. SLOW WALKER1 (SWA1)


Gene families : OG_01_0007663 (Gene family) Phylogenetic Tree(s): OG0007663_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre03.g196850
Cluster HCCA cluster: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT2G47990 EDA13, EDA19, SWA1 transducin family protein / WD-40 repeat family protein 0.1 Gene family
Cpa|evm.model.tig00020927.23 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.08 Gene family
GSVIVT01011022001 No alias 33.99 development.unspecified Encodes a transducin... 0.05 Gene family
LOC_Os07g12320 Os07g0224900 33.99 development.unspecified Encodes a transducin... 0.06 Gene family
Solyc05g010470.3.1 Solyc05g010470.3 27.2 RNA.transcription Encodes a transducin family... 0.11 Gene family
Zm00001d019200 No alias 33.99 development.unspecified Encodes a transducin... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEA InterProScan
BP GO:0006364 rRNA processing IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 162 198
IPR001680 WD40_repeat 210 239
IPR018983 U3_snoRNA-assocProt_15_C 373 514
No external refs found!