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  5. Nbi_g18536

Nbi_g18536


Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18536

Target Alias Description ECC score Gene Family Method Actions
Adi_g054835 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06297 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35446 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g43029 No alias GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g15158 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024935001 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Ore_g09378 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008782 No alias GRAS-type transcription factor & original description: CDS=1-2172 0.02 OrthoFinder output from all 47 species
Spa_g10374 No alias GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16511 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41396 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28145 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e020937_P001 Zm00001e020937 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 465 835
No external refs found!