AT1G13195


Description : RING/U-box superfamily protein


Gene families : OG_01_0001188 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001188_tree ,
OG_02_0001068 (LandPlants) Phylogenetic Tree(s): OG_02_0001068_tree ,
OG_03_0000881 (SeedPlants) Phylogenetic Tree(s): OG_03_0000881_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13195
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT1G24440 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01010297001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01010299001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Pp3c4_24440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Zm00001e004460_P001 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
AT1G24440 No alias RING/U-box superfamily protein 0.02 LandPlants
GSVIVT01010297001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Zm00001e004453_P001 No alias RING-HC-class E3 ligase 0.02 LandPlants
Zm00001e004460_P001 No alias RING-HC-class E3 ligase 0.03 LandPlants
Zm00001e033280_P001 No alias RING-HC-class E3 ligase 0.02 LandPlants
AMTR_s00009p00266260 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
GSVIVT01010297001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
GSVIVT01010299001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants
Zm00001e018924_P001 No alias RING-HC-class E3 ligase 0.01 SeedPlants
Zm00001e033280_P001 No alias RING-HC-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0010200 response to chitin RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 161 200
No external refs found!