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  5. Nbi_g18447

Nbi_g18447 (SPT)


Aliases : SPT

Description : bHLH-type transcription factor & original description: none


Gene families : OG0010813 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0010813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18447
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cba_g26289 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g23106 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 484 531
No external refs found!