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  5. AT2G37580

AT2G37580


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G37580
Cluster HCCA cluster: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G35330 No alias RING/U-box superfamily protein 0.04 Gene family
AT1G72220 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G18670 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G03550 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G42200 No alias RING/U-box superfamily protein 0.02 Gene family
Cpa|evm.model.tig00000911.5 No alias No description available 0.01 Gene family
Cpa|evm.model.tig00020934.54 No alias No description available 0.02 Gene family
Cpa|evm.model.tig00020943.22 No alias No description available 0.02 Gene family
GSVIVT01022306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os01g60730 Os01g0822800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os02g15080 Os02g0248900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g15110 Os02g0249200 No description available 0.02 Gene family
LOC_Os02g46600 Os02g0692000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os03g28080 Os03g0398600 No description available 0.02 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g16060 Os06g0271600 No description available 0.02 Gene family
LOC_Os06g34400 Os06g0534900,... No description available 0.04 Gene family
LOC_Os06g34620 Os06g0537300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os08g37760 Os08g0484200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os08g44950 Os08g0563500 No description available 0.02 Gene family
LOC_Os09g37050 Os09g0542600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os10g39450 Os10g0540000 No description available 0.05 Gene family
LOC_Os10g39770 Os10g0544600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os12g02210 Os12g0113700 No description available 0.02 Gene family
MA_10072804g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10426834g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_184439g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_42543g0010 No alias No description available 0.02 Gene family
MA_69343g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo137213 PACid_15418424 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo172324 PACid_15411137 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo438800 PACid_15401761 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo8844 PACid_15408158 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc00g007220.3.1 Solyc00g007220.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g100100.3.1 Solyc01g100100.3 No description available 0.04 Gene family
Solyc02g083400.3.1 Solyc02g083400.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc02g086950.1.1 Solyc02g086950.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc03g033330.3.1 Solyc03g033330.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc03g114190.1.1 Solyc03g114190.1 No description available 0.04 Gene family
Solyc07g006400.2.1 Solyc07g006400.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc10g011880.1.1 Solyc10g011880.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc11g005320.1.1 Solyc11g005320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d002491 GRMZM2G090279 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016142 GRMZM2G324111 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Zm00001d018823 GRMZM2G029623 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d023341 GRMZM2G467576 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d027684 GRMZM2G056786 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d027685 GRMZM2G056804 No description available 0.03 Gene family
Zm00001d031100 No alias No description available 0.02 Gene family
Zm00001d040638 No alias No description available 0.04 Gene family
Zm00001d050514 GRMZM2G068239 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
MF GO:0016757 transferase activity, transferring glycosyl groups ISS Arabidopsis.org
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 140 184
No external refs found!