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  5. AT2G37340

AT2G37340 (RSZ33, AT-RS2Z33,...)


Aliases : RSZ33, AT-RS2Z33, RS2Z33, ATRSZ33

Description : arginine/serine-rich zinc knuckle-containing protein 33


Gene families : OG_01_0003283 (Gene family) Phylogenetic Tree(s): OG0003283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G37340
Cluster HCCA cluster: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021531.8 No alias 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.02 Gene family
GSVIVT01025580001 No alias 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.04 Gene family
GSVIVT01032633001 No alias 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.03 Gene family
LOC_Os03g17710 Os03g0285900 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.02 Gene family
Solyc05g054920.3.1 Solyc05g054920.3 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.06 Gene family
Zm00001d011004 GRMZM2G175419 27.1.1 RNA.processing.splicing encodes an RS-containing... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000245 spliceosomal complex assembly TAS Arabidopsis.org
BP GO:0000398 mRNA splicing, via spliceosome RCA Arabidopsis.org
BP GO:0000398 mRNA splicing, via spliceosome TAS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0008380 RNA splicing NAS Arabidopsis.org
CC GO:0016607 nuclear speck IDA Arabidopsis.org
BP GO:0048573 photoperiodism, flowering RCA Arabidopsis.org
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 74
IPR001878 Znf_CCHC 100 115
IPR001878 Znf_CCHC 121 138
No external refs found!