AT2G37270 (RPS5B, ATRPS5B)

Aliases : RPS5B, ATRPS5B

Description : ribosomal protein 5B

Gene families : OG_01_0003282 (Gene family) Phylogenetic Tree(s): OG0003282_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G37270
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021332.10 No alias protein.synthesis.ribosomal... 0.32 Gene family
Cre06.g290950 No alias protein.synthesis.ribosomal... 0.22 Gene family
GSVIVT01026328001 No alias protein.synthesis.ribosomal... 0.22 Gene family
GSVIVT01033419001 No alias protein.synthesis.ribosomal... 0.24 Gene family
LOC_Os01g01060 Os01g0100700 protein.synthesis.ribosomal... 0.32 Gene family
LOC_Os11g29190 Os11g0482000 protein.synthesis.ribosomal... 0.26 Gene family
MA_10428487g0010 No alias protein.synthesis.ribosomal... 0.07 Gene family
Smo164593 PACid_15411447 No description available 0.23 Gene family
Smo271466 PACid_15423175 No description available 0.15 Gene family
Solyc10g078620.1.1 Solyc10g078620.1 protein.synthesis.ribosomal... 0.29 Gene family
Solyc11g042610.2.1 Solyc11g042610.2 protein.synthesis.ribosomal... 0.32 Gene family
Zm00001d008387 GRMZM2G156673 protein.synthesis.ribosomal... 0.4 Gene family
Zm00001d037929 GRMZM2G078985 protein.synthesis.ribosomal... 0.33 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS
CC GO:0005618 cell wall IDA
CC GO:0005774 vacuolar membrane IDA
CC GO:0005829 cytosol IDA
CC GO:0005840 ribosome ISS
CC GO:0005886 plasma membrane IDA
BP GO:0006412 translation ISS
CC GO:0009506 plasmodesma IDA
CC GO:0009507 chloroplast IDA
CC GO:0009507 chloroplast ISM
BP GO:0009735 response to cytokinin IDA
CC GO:0016020 membrane IDA
CC GO:0022626 cytosolic ribosome IDA
CC GO:0022627 cytosolic small ribosomal subunit IDA
CC GO:0022627 cytosolic small ribosomal subunit ISS
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 62 207
No external refs found!