Nbi_g18388

Description : not classified & original description: none

Gene families : OG0004671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004671_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g18388

Target	Alias	Description	ECC score	Gene Family Method
Len_g03372	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_708045g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pnu_g10611	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17506	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g005910.2.1	Solyc10g005910	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Tin_g08530	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e016417_P001	Zm00001e016417	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032859	KH_dom-like	570	649
IPR006073	GTP-bd	186	307
IPR006073	GTP-bd	383	506

External Links

No external refs found!