AT2G37040 (ATPAL1, PAL1)


Aliases : ATPAL1, PAL1

Description : PHE ammonia lyase 1


Gene families : OG_01_0000256 (Gene family) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G37040
Cluster HCCA cluster: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01006148001 No alias No description available 0.02 Gene family
GSVIVT01015124001 No alias No description available 0.03 Gene family
GSVIVT01015138001 No alias No description available 0.03 Gene family
GSVIVT01015140001 No alias No description available 0.02 Gene family
GSVIVT01016257001 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
GSVIVT01024292001 No alias No description available 0.04 Gene family
GSVIVT01024295001 No alias No description available 0.05 Gene family
GSVIVT01024299001 No alias No description available 0.03 Gene family
GSVIVT01024306001 No alias No description available 0.03 Gene family
GSVIVT01024315001 No alias No description available 0.03 Gene family
GSVIVT01025214001 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.06 Gene family
GSVIVT01025703001 No alias No description available 0.06 Gene family
LOC_Os02g41650 Os02g0626400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
LOC_Os02g41670 Os02g0626600 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.05 Gene family
LOC_Os02g41680 Os02g0627100 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
LOC_Os04g43760 Os04g0518100 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
LOC_Os04g43800 Os04g0518400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
LOC_Os05g35290 Os05g0427400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.05 Gene family
MA_123220g0010 No alias No description available 0.04 Gene family
MA_44561g0010 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Solyc05g056170.3.1 Solyc05g056170.3 No description available 0.06 Gene family
Solyc09g007910.3.1 Solyc09g007910.3 No description available 0.02 Gene family
Zm00001d017275 GRMZM2G029048 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0006598 polyamine catabolic process RCA Arabidopsis.org
BP GO:0006952 defense response TAS Arabidopsis.org
BP GO:0006979 response to oxidative stress IEP Arabidopsis.org
BP GO:0009555 pollen development IMP Arabidopsis.org
BP GO:0009611 response to wounding RCA Arabidopsis.org
BP GO:0009611 response to wounding TAS Arabidopsis.org
BP GO:0009698 phenylpropanoid metabolic process RCA Arabidopsis.org
BP GO:0009699 phenylpropanoid biosynthetic process TAS Arabidopsis.org
BP GO:0009805 coumarin biosynthetic process RCA Arabidopsis.org
BP GO:0009819 drought recovery IMP Arabidopsis.org
BP GO:0009963 positive regulation of flavonoid biosynthetic process RCA Arabidopsis.org
BP GO:0010224 response to UV-B IMP Arabidopsis.org
BP GO:0042398 cellular modified amino acid biosynthetic process RCA Arabidopsis.org
MF GO:0045548 phenylalanine ammonia-lyase activity IDA Arabidopsis.org
MF GO:0045548 phenylalanine ammonia-lyase activity ISS Arabidopsis.org
MF GO:0045548 phenylalanine ammonia-lyase activity TAS Arabidopsis.org
BP GO:0046244 salicylic acid catabolic process IMP Arabidopsis.org
BP GO:0046274 lignin catabolic process IMP Arabidopsis.org
BP GO:0080167 response to karrikin IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 72 546
No external refs found!