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  5. Nbi_g18342

Nbi_g18342


Description : histone demethylase *(JMJD6) & original description: none


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18342

Target Alias Description ECC score Gene Family Method Actions
Cba_g66219 No alias histone demethylase *(JMJD6) & original description: none 0.08 OrthoFinder output from all 47 species
MA_10428233g0010 No alias transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Ppi_g09357 No alias histone demethylase *(JMJD6) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34209 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo78122 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 104 144
IPR041667 Cupin_8 217 435
No external refs found!