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  5. Nbi_g18324

Nbi_g18324


Description : not classified & original description: none


Gene families : OG0000445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000445_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18324
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AT3G02960 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G63530 FP3, ATFP3 farnesylated protein 3 0.07 OrthoFinder output from all 47 species
Ceric.11G048500.1 Ceric.11G048500 not classified & original description: pacid=50594833... 0.03 OrthoFinder output from all 47 species
Dde_g23484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031502001 No alias Heavy metal-associated isoprenylated plant protein 3... 0.03 OrthoFinder output from all 47 species
LOC_Os04g50020.1 LOC_Os04g50020 Heavy metal-associated isoprenylated plant protein 4... 0.02 OrthoFinder output from all 47 species
Len_g57009 FP3, ATFP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02703 FP3, ATFP3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g086280.2.1 Solyc10g086280 Heavy metal-associated isoprenylated plant protein 5... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 48 101
No external refs found!