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  5. Nbi_g18316

Nbi_g18316


Description : substrate adaptor of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0003509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18316

Target Alias Description ECC score Gene Family Method Actions
Aop_g12374 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
MA_10437190g0010 No alias F-box protein At1g70590 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ore_g00832 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Pir_g12152 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006597 Sel1-like 313 329
IPR006597 Sel1-like 364 398
IPR006597 Sel1-like 331 362
IPR006597 Sel1-like 399 434
No external refs found!