AT2G35000

Description : RING/U-box superfamily protein

Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT2G35000
Cluster	HCCA cluster: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AT1G49230	No alias	RING/U-box superfamily protein	0.05	Gene family
AT2G17730	NIP2	NEP-interacting protein 2	0.03	Gene family
AT2G42360	No alias	RING/U-box superfamily protein	0.03	Gene family
AT2G44578	No alias	RING/U-box superfamily protein	0.03	Gene family
AT4G09120	No alias	RING/U-box superfamily protein	0.03	Gene family
AT4G15975	No alias	RING/U-box superfamily protein	0.04	Gene family
AT4G33565	No alias	RING/U-box superfamily protein	0.03	Gene family
AT4G35480	RHA3B	RING-H2 finger A3B	0.02	Gene family
AT4G35840	No alias	RING/U-box superfamily protein	0.03	Gene family
AT5G07040	No alias	RING/U-box superfamily protein	0.03	Gene family
AT5G10380	ATRING1, RING1	RING/U-box superfamily protein	0.03	Gene family
AT5G27420	ATL31, CNI1	carbon/nitrogen insensitive 1	0.05	Gene family
AT5G66070	No alias	RING/U-box superfamily protein	0.04	Gene family
Cpa\|evm.model.tig00020704.75	No alias	No description available	0.01	Gene family
Cre01.g051700	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
GSVIVT01000015001	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
GSVIVT01015682001	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
GSVIVT01020665001	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.04	Gene family
GSVIVT01026703001	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
GSVIVT01032684001	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.04	Gene family
GSVIVT01037651001	No alias	35.1 not assigned.no ontology RING/U-box superfamily protein	0.02	Gene family
LOC_Os01g20910	Os01g0311100	No description available	0.02	Gene family
LOC_Os01g53500	Os01g0736600	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
LOC_Os02g15080	Os02g0248900	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.01	Gene family
LOC_Os02g36330	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
LOC_Os03g05570	Os03g0149800	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.04	Gene family
LOC_Os03g44636	Os03g0648600	No description available	0.04	Gene family
LOC_Os03g44642	No alias	No description available	0.01	Gene family
LOC_Os04g37740	Os04g0450400	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
LOC_Os04g49550	Os04g0585000	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.04	Gene family
LOC_Os05g11860	No alias	No description available	0.02	Gene family
LOC_Os06g09310	Os06g0192800	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
LOC_Os06g11450	Os06g0218300	No description available	0.03	Gene family
LOC_Os06g16060	Os06g0271600	No description available	0.05	Gene family
LOC_Os06g34530	Os06g0536100	No description available	0.03	Gene family
LOC_Os06g34560	Os06g0536466,...	No description available	0.03	Gene family
LOC_Os06g34620	Os06g0537300	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
LOC_Os06g34880	Os06g0540200	No description available	0.02	Gene family
LOC_Os09g37050	Os09g0542600	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
LOC_Os12g24490	Os12g0432600	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3...	0.02	Gene family
MA_101154g0010	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
MA_10436028g0020	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
MA_126287g0010	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
MA_152783g0010	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
MA_25345g0010	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
MA_43543g0010	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
MA_634100g0010	No alias	No description available	0.01	Gene family
MA_77628g0010	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
MA_80729g0030	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Smo59303	PACid_15409233	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Smo96681	PACid_15409405	No description available	0.01	Gene family
Solyc00g007220.3.1	Solyc00g007220.3	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8	0.04	Gene family
Solyc00g136260.1.1	Solyc00g136260.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Solyc01g100095.1.1	Solyc01g100095.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.07	Gene family
Solyc03g114190.1.1	Solyc03g114190.1	No description available	0.05	Gene family
Solyc03g123680.1.1	Solyc03g123680.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.05	Gene family
Solyc04g009780.1.1	Solyc04g009780.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.01	Gene family
Solyc04g074790.2.1	Solyc04g074790.2	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Solyc04g082690.1.1	Solyc04g082690.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8	0.02	Gene family
Solyc06g064440.3.1	Solyc06g064440.3	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Solyc08g076830.1.1	Solyc08g076830.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Solyc09g066300.2.1	Solyc09g066300.2	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.04	Gene family
Solyc09g075320.1.1	Solyc09g075320.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.01	Gene family
Solyc10g008080.2.1	Solyc10g008080.2	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Solyc10g011880.1.1	Solyc10g011880.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Solyc10g081780.2.1	Solyc10g081780.2	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.05	Gene family
Solyc10g081790.1.1	Solyc10g081790.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.04	Gene family
Solyc11g005320.1.1	Solyc11g005320.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Solyc11g066510.2.1	Solyc11g066510.2	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Solyc12g055710.1.1	Solyc12g055710.1	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Solyc12g087860.2.1	Solyc12g087860.2	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d002535	GRMZM2G146847	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d003497	GRMZM2G171277	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d005936	GRMZM2G015753	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d014949	GRMZM2G053707	No description available	0.02	Gene family
Zm00001d016142	GRMZM2G324111	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d016840	GRMZM2G460958	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.04	Gene family
Zm00001d018028	GRMZM2G140651	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.01	Gene family
Zm00001d020789	GRMZM2G082653	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d021316	GRMZM2G449875	No description available	0.01	Gene family
Zm00001d027685	GRMZM2G056804	No description available	0.04	Gene family
Zm00001d029806	GRMZM2G052344	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.01	Gene family
Zm00001d031880	No alias	No description available	0.03	Gene family
Zm00001d037019	GRMZM2G026562	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL43	0.03	Gene family
Zm00001d037192	GRMZM2G329195	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d037300	GRMZM2G324375	No description available	0.04	Gene family
Zm00001d037943	GRMZM2G340444	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Zm00001d045051	GRMZM2G478553	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Zm00001d046147	No alias	No description available	0.03	Gene family
Zm00001d046151	GRMZM2G121143	No description available	0.04	Gene family
Zm00001d050514	GRMZM2G068239	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d050798	GRMZM2G044773	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Zm00001d051833	GRMZM5G885045	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.03	Gene family
Zm00001d051894	GRMZM2G146228	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.04	Gene family
Zm00001d053236	GRMZM2G132531	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING...	0.02	Gene family
Zm00001d053734	GRMZM2G363520	No description available	0.01	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Arabidopsis.org
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Arabidopsis.org
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Arabidopsis.org
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010200	response to chitin	IEP	Arabidopsis.org
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0016567	protein ubiquitination	IDA	Arabidopsis.org
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Arabidopsis.org
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050832	defense response to fungus	IMP	Arabidopsis.org
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	134	177

External Links

No external refs found!

AT2G35000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation