Nbi_g17975 (HVT1, ATVT-1)

Aliases : HVT1, ATVT-1

Description : not classified & original description: none

Gene families : OG0005875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005875_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g17975
Cluster	HCCA: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method	Actions
Ceric.16G053600.1	HVT1, ATVT-1,...	not classified & original description: pacid=50590253...	0.03	OrthoFinder output from all 47 species
Spa_g10294	HVT1, ATVT-1	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	802	884
IPR011709	DEAD-box_helicase_OB_fold	962	1049
IPR001650	Helicase_C	619	737
IPR011545	DEAD/DEAH_box_helicase_dom	252	409
IPR001374	R3H_dom	86	142

External Links

No external refs found!