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  5. Nbi_g17958

Nbi_g17958


Description : not classified & original description: none


Gene families : OG0002355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g17958

Target Alias Description ECC score Gene Family Method Actions
Adi_g018471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g026365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g026366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g00887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.74 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g11705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026980001 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g22250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002163 No alias not classified & original description: CDS=116-802 0.03 OrthoFinder output from all 47 species
Sam_g09503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 104 212
No external refs found!