Cre03.g193800


Description : 29.1.22 protein.aa activation.asparagine-tRNA ligase Encodes a putative cytosolic asparaginyl-tRNA synthetase. SYNC1


Gene families : OG_01_0001807 (Gene family) Phylogenetic Tree(s): OG0001807_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre03.g193800
Cluster HCCA cluster: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT4G17300 ATNS1, NS1, OVA8 Class II aminoacyl-tRNA and biotin synthetases... 0.01 Gene family
GSVIVT01015254001 No alias 29.1.22 protein.aa activation.asparagine-tRNA ligase... 0.01 Gene family
LOC_Os01g27520 Os01g0372700 29.1.22 protein.aa activation.asparagine-tRNA ligase SYNC3 0.02 Gene family
Solyc03g019940.3.1 Solyc03g019940.3 29.1.22 protein.aa activation.asparagine-tRNA ligase... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004364 aa-tRNA-synt_II 228 494
IPR004364 aa-tRNA-synt_II 75 137
No external refs found!