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  5. Nbi_g17844

Nbi_g17844


Description : not classified & original description: none


Gene families : OG0001636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g17844

Target Alias Description ECC score Gene Family Method Actions
AT2G29670 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g008339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440903 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g03491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12759 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!