AT1G12310


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0000031 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000031_tree ,
OG_02_0009399 (LandPlants) Phylogenetic Tree(s): OG_02_0009399_tree ,
OG_03_0006499 (SeedPlants) Phylogenetic Tree(s): OG_03_0006499_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12310
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00127800 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.03 Archaeplastida
AT3G56800 CAM3, acam-3 calmodulin 3 0.03 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.06 Archaeplastida
AT5G21274 ACAM-6, CAM6 calmodulin 6 0.04 Archaeplastida
AT5G37780 TCH1, CAM1, ACAM-1 calmodulin 1 0.03 Archaeplastida
Cre03.g178150 No alias Calmodulin OS=Chlamydomonas reinhardtii 0.02 Archaeplastida
Cre10.g466650 No alias No description available 0.02 Archaeplastida
Cre11.g468450 No alias RNA processing.messenger ribonucleoprotein particle... 0.04 Archaeplastida
GSVIVT01004914001 No alias Probable calcium-binding protein CML13 OS=Arabidopsis thaliana 0.09 Archaeplastida
Gb_09082 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_20553 No alias Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 248.0) 0.03 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os05g41210.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.06 Archaeplastida
MA_103558g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_18615g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_66144g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Mp1g00920.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
Mp6g20440.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Archaeplastida
Pp3c17_17270V3.1 No alias centrin2 0.02 Archaeplastida
Pp3c24_2030V3.1 No alias calmodulin 5 0.03 Archaeplastida
Pp3c6_23740V3.1 No alias calmodulin like 23 0.02 Archaeplastida
Pp3c9_25180V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Smo141966 No alias Calmodulin-1 OS=Oryza sativa subsp. indica 0.05 Archaeplastida
Solyc02g067220.4.1 No alias no description available(sp|q93z27|cml46_arath : 83.2) 0.04 Archaeplastida
Solyc04g008000.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.04 Archaeplastida
Solyc05g050750.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g150132.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc09g055880.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e001501_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
Zm00001e007722_P001 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e009213_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e017290_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.06 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e027331_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.08 Archaeplastida
Zm00001e029211_P001 No alias Probable calcium-binding protein CML7 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e031996_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e038302_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
Zm00001e039793_P001 No alias Probable calcium-binding protein CML28 OS=Oryza sativa... 0.05 Archaeplastida
GSVIVT01004914001 No alias Probable calcium-binding protein CML13 OS=Arabidopsis thaliana 0.06 LandPlants
Solyc03g083520.4.1 No alias Probable calcium-binding protein CML13 OS=Arabidopsis... 0.03 LandPlants
Zm00001e029211_P001 No alias Probable calcium-binding protein CML7 OS=Oryza sativa... 0.04 LandPlants
GSVIVT01004914001 No alias Probable calcium-binding protein CML13 OS=Arabidopsis thaliana 0.06 SeedPlants
LOC_Os08g02420.1 No alias Probable calcium-binding protein CML7 OS=Oryza sativa... 0.02 SeedPlants
Solyc03g083520.4.1 No alias Probable calcium-binding protein CML13 OS=Arabidopsis... 0.03 SeedPlants
Solyc11g072270.3.1 No alias Probable calcium-binding protein CML13 OS=Arabidopsis... 0.02 SeedPlants
Zm00001e029211_P001 No alias Probable calcium-binding protein CML7 OS=Oryza sativa... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 145
IPR002048 EF_hand_dom 14 42
No external refs found!