AT1G12250


Description : Pentapeptide repeat-containing protein


Gene families : OG_01_0003909 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003909_tree ,
OG_02_0006822 (LandPlants) Phylogenetic Tree(s): OG_02_0006822_tree ,
OG_03_0010075 (SeedPlants) Phylogenetic Tree(s): OG_03_0010075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12250
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cre17.g721700 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 Archaeplastida
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 Archaeplastida
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.09 Archaeplastida
LOC_Os02g42960.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 Archaeplastida
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.06 Archaeplastida
Pp3c21_17930V3.1 No alias Pentapeptide repeat-containing protein 0.02 Archaeplastida
Pp3c25_4010V3.1 No alias Pentapeptide repeat-containing protein 0.04 Archaeplastida
Smo96317 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 Archaeplastida
Solyc08g079110.4.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 Archaeplastida
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 LandPlants
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 LandPlants
LOC_Os02g42960.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 LandPlants
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 LandPlants
Pp3c21_17930V3.1 No alias Pentapeptide repeat-containing protein 0.02 LandPlants
Smo96317 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 LandPlants
Solyc08g079110.4.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 LandPlants
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 SeedPlants
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 SeedPlants
LOC_Os02g42960.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 SeedPlants
MA_10429697g0010 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 SeedPlants
Solyc08g079110.4.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009543 chloroplast thylakoid lumen ISS Interproscan
CC GO:0009579 thylakoid IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001646 5peptide_repeat 176 208
IPR001646 5peptide_repeat 134 170
No external refs found!