AT2G28960

Description : Leucine-rich repeat protein kinase family protein

Gene families : OG_01_0000039 (Gene family) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT2G28960
Cluster	HCCA cluster: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
AT1G51790	No alias	Leucine-rich repeat protein kinase family protein	0.05	Gene family
AT1G51800	No alias	Leucine-rich repeat protein kinase family protein	0.04	Gene family
AT1G51805	No alias	Leucine-rich repeat protein kinase family protein	0.08	Gene family
AT1G51880	RHS6	root hair specific 6	0.03	Gene family
AT1G51890	No alias	Leucine-rich repeat protein kinase family protein	0.04	Gene family
AT2G04300	No alias	Leucine-rich repeat protein kinase family protein	0.07	Gene family
AT2G19190	FRK1	FLG22-induced receptor-like kinase 1	0.03	Gene family
AT3G21340	No alias	Leucine-rich repeat protein kinase family protein	0.03	Gene family
AT5G59670	No alias	Leucine-rich repeat protein kinase family protein	0.07	Gene family
GSVIVT01016915001	No alias	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.03	Gene family
GSVIVT01016934001	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.05	Gene family
GSVIVT01016937001	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.05	Gene family
GSVIVT01016943001	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.05	Gene family
GSVIVT01016946001	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.06	Gene family
LOC_Os01g03370	Os01g0124500	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.02	Gene family
LOC_Os05g32660	Os05g0393100	No description available	0.04	Gene family
LOC_Os09g09220	Os09g0264950,...	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.02	Gene family
LOC_Os09g18020	Os09g0349650,...	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.02	Gene family
LOC_Os09g18230	Os09g0351700,...	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.02	Gene family
LOC_Os09g18260	Os09g0352000	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.02	Gene family
LOC_Os09g18594	Os09g0355400	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.04	Gene family
LOC_Os09g19160	Os09g0356200	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.05	Gene family
LOC_Os09g19229	Os09g0356800	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.04	Gene family
LOC_Os09g19390	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.04	Gene family
LOC_Os09g19400	Os09g0358700	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.04	Gene family
LOC_Os09g19510	Os09g0359500	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.04	Gene family
LOC_Os12g37980	Os12g0567500	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.04	Gene family
MA_10436349g0010	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.04	Gene family
MA_12782g0020	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.01	Gene family
MA_155031g0010	No alias	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.03	Gene family
MA_172818g0010	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.03	Gene family
MA_17587g0010	No alias	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.03	Gene family
MA_2906g0010	No alias	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.02	Gene family
MA_90831g0010	No alias	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.02	Gene family
MA_933993g0010	No alias	No description available	0.01	Gene family
Solyc02g091590.3.1	Solyc02g091590.3	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.03	Gene family
Solyc03g093380.2.1	Solyc03g093380.2	30.2.99 signalling.receptor kinases.misc Leucine-rich...	0.02	Gene family
Solyc03g121230.3.1	Solyc03g121230.3	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.05	Gene family
Solyc06g062450.3.1	Solyc06g062450.3	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.04	Gene family
Zm00001d021829	GRMZM2G700291	30.2.1 signalling.receptor kinases.leucine rich repeat I...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Arabidopsis.org
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Arabidopsis.org
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Arabidopsis.org
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010043	response to zinc ion	RCA	Arabidopsis.org
BP	GO:0010106	cellular response to iron ion starvation	RCA	Arabidopsis.org
BP	GO:0010167	response to nitrate	RCA	Arabidopsis.org
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transport	RCA	Arabidopsis.org
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Arabidopsis.org
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR024788	Malectin-like_Carb-bd_dom	35	352
IPR000719	Prot_kinase_dom	576	840
IPR001611	Leu-rich_rpt	412	468

External Links

No external refs found!

AT2G28960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation