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  5. MA_71865g0010

MA_71865g0010


Description : plastidial mRNA processing factor (PPR10)


Gene families : OG_01_0002673 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002673_tree ,
OG_02_0001952 (LandPlants) Phylogenetic Tree(s): OG_02_0001952_tree ,
OG_03_0001479 (SeedPlants) Phylogenetic Tree(s): OG_03_0001479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_71865g0010
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida
Mp8g08650.1 No alias plastidial mRNA processing factor (PPR10) 0.04 Archaeplastida
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida
Zm00001e030419_P001 No alias plastidial mRNA processing factor (PPR10) 0.04 Archaeplastida
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
Mp8g08650.1 No alias plastidial mRNA processing factor (PPR10) 0.04 LandPlants
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.03 LandPlants
Zm00001e030419_P001 No alias plastidial mRNA processing factor (PPR10) 0.04 LandPlants
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.03 SeedPlants
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.03 SeedPlants
Zm00001e030419_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 325 386
IPR002885 Pentatricopeptide_repeat 255 316
IPR002885 Pentatricopeptide_repeat 446 506
IPR002885 Pentatricopeptide_repeat 772 820
IPR002885 Pentatricopeptide_repeat 702 749
IPR002885 Pentatricopeptide_repeat 597 646
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 839 869
No external refs found!