MA_71865g0010


Description : plastidial mRNA processing factor (PPR10)


Gene families : OG_01_0002673 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002673_tree ,
OG_02_0001952 (LandPlants) Phylogenetic Tree(s): OG_02_0001952_tree ,
OG_03_0001479 (SeedPlants) Phylogenetic Tree(s): OG_03_0001479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_71865g0010
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida
Mp8g08650.1 No alias plastidial mRNA processing factor (PPR10) 0.04 Archaeplastida
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida
Zm00001e030419_P001 No alias plastidial mRNA processing factor (PPR10) 0.04 Archaeplastida
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
Mp8g08650.1 No alias plastidial mRNA processing factor (PPR10) 0.04 LandPlants
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.03 LandPlants
Zm00001e030419_P001 No alias plastidial mRNA processing factor (PPR10) 0.04 LandPlants
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.03 SeedPlants
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.03 SeedPlants
Zm00001e030419_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 325 386
IPR002885 Pentatricopeptide_repeat 255 316
IPR002885 Pentatricopeptide_repeat 446 506
IPR002885 Pentatricopeptide_repeat 772 820
IPR002885 Pentatricopeptide_repeat 702 749
IPR002885 Pentatricopeptide_repeat 597 646
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 839 869
No external refs found!