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  5. Nbi_g17421

Nbi_g17421


Description : not classified & original description: none


Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g17421
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Aev_g21406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G024800.1 Ceric.01G024800 not classified & original description: pacid=50592459... 0.03 OrthoFinder output from all 47 species
Dac_g07034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03091 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g05090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_21932 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_31980 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g47055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10433891g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9297837g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g18360.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp8g14870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g44436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008010 No alias not classified & original description: CDS=1-366 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014888 No alias not classified & original description: CDS=1-3741 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022429 No alias not classified & original description: CDS=62-3433 0.03 OrthoFinder output from all 47 species
Spa_g41427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55806 LNG1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g55838 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g10611 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 901 1070
IPR022212 DUF3741 250 281
IPR032795 DUF3741-assoc 125 142
No external refs found!