AT2G28000 (CH-CPN60A, CPN60A, SLP)


Aliases : CH-CPN60A, CPN60A, SLP

Description : chaperonin-60alpha


Gene families : OG_01_0000305 (Gene family) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G28000
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001269.7 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.01 Gene family
Cre04.g231222 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.09 Gene family
Cre06.g309100 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.05 Gene family
Cre07.g339150 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.12 Gene family
Cre17.g741450 No alias 1.3.13 PS.calvin cycle.rubisco interacting encodes the... 0.04 Gene family
GSVIVT01025490001 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.15 Gene family
GSVIVT01029025001 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.04 Gene family
GSVIVT01031526001 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.21 Gene family
LOC_Os03g04970 Os03g0143400 29.6 protein.folding mitochondrial chaperonin HSP.... 0.04 Gene family
LOC_Os06g02380 Os06g0114000 No description available 0.09 Gene family
LOC_Os10g32550 Os10g0462900 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
LOC_Os12g17910 Os12g0277500 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.03 Gene family
MA_10436324g0010 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
Smo165043 PACid_15410433 No description available 0.12 Gene family
Solyc01g028810.3.1 Solyc01g028810.3 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.05 Gene family
Solyc05g053470.3.1 Solyc05g053470.3 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
Solyc09g091180.3.1 Solyc09g091180.3 29.6 protein.folding mitochondrial chaperonin HSP.... 0.08 Gene family
Solyc11g069790.2.1 Solyc11g069790.2 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.07 Gene family
Zm00001d014090 GRMZM2G111477,... 29.6 protein.folding mitochondrial chaperonin HSP.... 0.08 Gene family
Zm00001d032789 GRMZM2G416120 29.6 protein.folding mitochondrial chaperonin HSP.... 0.04 Gene family
Zm00001d034919 GRMZM2G434173 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.04 Gene family
Zm00001d035937 GRMZM2G095252,... No description available 0.03 Gene family
Zm00001d045544 GRMZM2G083716 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.05 Gene family

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IDA Arabidopsis.org
BP GO:0006457 protein folding TAS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISS Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
CC GO:0009579 thylakoid IDA Arabidopsis.org
BP GO:0009658 chloroplast organization IMP Arabidopsis.org
BP GO:0009658 chloroplast organization RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy RCA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0016226 iron-sulfur cluster assembly RCA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0048046 apoplast IDA Arabidopsis.org
BP GO:0048481 plant ovule development RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 68 571
No external refs found!