AT2G27900


Description : CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).


Gene families : OG_01_0004609 (Gene family) Phylogenetic Tree(s): OG0004609_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G27900
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cre10.g443350 No alias 35.2 not assigned.unknown 0.02 Gene family
GSVIVT01031444001 No alias 35.2 not assigned.unknown 0.07 Gene family
MA_379785g0010 No alias 35.2 not assigned.unknown 0.04 Gene family
Zm00001d029818 GRMZM2G090100,... 35.2 not assigned.unknown 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006486 protein glycosylation RCA Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019514 Syndetin_C 890 1120
IPR019515 VPS54_N 132 421
No external refs found!