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  5. Nbi_g17080

Nbi_g17080


Description : not classified & original description: none


Gene families : OG0000462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g17080
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00116p00101320 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Dde_g50728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02249 No alias E3 ubiquitin ligase *(SINA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16841 No alias E3 ubiquitin ligase *(SINA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20222 No alias E3 ubiquitin ligase *(SINA) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c8_1840V3.1 Pp3c8_1840 Protein with RING/U-box and TRAF-like domains 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 110 281
No external refs found!