AT2G24790 (COL3, ATCOL3)


Aliases : COL3, ATCOL3

Description : CONSTANS-like 3


Gene families : OG_01_0000267 (Gene family) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G24790
Cluster HCCA cluster: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01036037001 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0009637 response to blue light RCA Arabidopsis.org
BP GO:0009644 response to high light intensity RCA Arabidopsis.org
BP GO:0009744 response to sucrose RCA Arabidopsis.org
BP GO:0010099 regulation of photomorphogenesis IMP Arabidopsis.org
BP GO:0010114 response to red light RCA Arabidopsis.org
BP GO:0010155 regulation of proton transport RCA Arabidopsis.org
BP GO:0010161 red light signaling pathway IMP Arabidopsis.org
BP GO:0010218 response to far red light RCA Arabidopsis.org
BP GO:0032880 regulation of protein localization RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000315 Znf_B-box 48 93
IPR000315 Znf_B-box 5 47
IPR010402 CCT_domain 229 271
No external refs found!