Cre03.g189400


Description : 29.1.11 protein.aa activation.serine-tRNA ligase seryl-tRNA synthetase / serine--tRNA ligase


Gene families : OG_01_0004312 (Gene family) Phylogenetic Tree(s): OG0004312_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre03.g189400
Cluster HCCA cluster: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT5G27470 No alias seryl-tRNA synthetase / serine--tRNA ligase 0.03 Gene family
Cpa|evm.model.tig00020610.57 No alias 29.1.11 protein.aa activation.serine-tRNA ligase... 0.06 Gene family
LOC_Os01g37837 Os01g0559100 29.1.11 protein.aa activation.serine-tRNA ligase... 0.03 Gene family
LOC_Os03g10190 Os03g0198400 29.1.11 protein.aa activation.serine-tRNA ligase... 0.01 Gene family
MA_10433279g0010 No alias 29.1.11 protein.aa activation.serine-tRNA ligase... 0.01 Gene family
Smo231245 PACid_15415292 No description available 0.01 Gene family
Smo99251 PACid_15415093 No description available 0.03 Gene family
Solyc01g098870.3.1 Solyc01g098870.3 29.1.11 protein.aa activation.serine-tRNA ligase... 0.04 Gene family
Zm00001d048174 No alias 29.1.11 protein.aa activation.serine-tRNA ligase... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015866 Ser-tRNA-synth_1_N 1 112
IPR002314 aa-tRNA-synt_IIb 227 416
No external refs found!