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  5. Nbi_g17013

Nbi_g17013


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g17013
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT1G33680 No alias KH domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g077319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32757 No alias virus infection resistance factor *(BTR1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g08444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33846.t1 Aspi01Gene33846 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G027700.1 Ceric.03G027700 not classified & original description: pacid=50573278... 0.04 OrthoFinder output from all 47 species
Ceric.20G036400.1 Ceric.20G036400 not classified & original description: pacid=50567078... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.157 No alias Protein BTR1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre06.g250800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Len_g24459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_13061g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g17404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g095960.3.1 Solyc12g095960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e014452_P001 Zm00001e014452 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e029163_P001 Zm00001e029163 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 285 350
IPR004088 KH_dom_type_1 379 443
No external refs found!