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  5. Nbi_g16957

Nbi_g16957 (RAT5, HTA1, ATHTA1)


Aliases : RAT5, HTA1, ATHTA1

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16957
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
MA_213048g0010 HTA7 histone (H2A) 0.02 OrthoFinder output from all 47 species
Nbi_g42735 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0001534 radial spoke IEP HCCA
BP GO:0003341 cilium movement IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030030 cell projection organization IEP HCCA
BP GO:0030031 cell projection assembly IEP HCCA
BP GO:0044782 cilium organization IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0060271 cilium assembly IEP HCCA
BP GO:0060294 cilium movement involved in cell motility IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0120031 plasma membrane bounded cell projection assembly IEP HCCA
BP GO:0120036 plasma membrane bounded cell projection organization IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 39 115
IPR032454 Histone_H2A_C 118 152
No external refs found!