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  5. Nbi_g16940

Nbi_g16940 (FIB4)


Aliases : FIB4

Description : Fibrillin plastoglobule core protein *(FBN4) & original description: none


Gene families : OG0008073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16940
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00248050 FIB4,... Plastid-lipid-associated protein 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
Als_g13760 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Aob_g08250 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Cba_g07385 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.73 FIB4 No description available 0.01 OrthoFinder output from all 47 species
Dde_g18790 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g18342 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.04 OrthoFinder output from all 47 species
Ore_g04923 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13704 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Solyc09g090330.3.1 FIB4, Solyc09g090330 Plastid-lipid-associated protein 6, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 48 241
No external refs found!