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  5. Nbi_g16873

Nbi_g16873


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16873

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00085750 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.03 OrthoFinder output from all 47 species
Ala_g04527 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g08311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g60198 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08000.t1 Aspi01Gene08000 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22211.t1 Aspi01Gene22211 component *(HHP1) of histone deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene37704.t1 Aspi01Gene37704 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47954.t1 Aspi01Gene47954 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10827 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28438 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g20948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g48929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09548 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g13031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc07g040960.1.1 Solyc07g040960 Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc12g009000.1.1 Solyc12g009000 Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g04326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07473 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 259 415
No external refs found!