Nbi_g16805


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16805

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.05 OrthoFinder output from all 47 species
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
Adi_g005800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g022088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g11518 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24726 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g33844 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g35531 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30162 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g40168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g47260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67763 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67892 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68455 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68927 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48128.t1 Aspi01Gene48128 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70275.t1 Aspi01Gene70275 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s4317.g118723 No alias ssDNA-binding protein *(OSB) & original description: CDS=173-1369 0.09 OrthoFinder output from all 47 species
Cba_g05214 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g45877 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.22G077500.1 Ceric.22G077500 not classified & original description: pacid=50615168... 0.04 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.34G056100.1 Ceric.34G056100 not classified & original description: pacid=50623335... 0.06 OrthoFinder output from all 47 species
Ceric.36G012600.1 Ceric.36G012600 not classified & original description: pacid=50568766... 0.04 OrthoFinder output from all 47 species
Dac_g04642 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g30161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g36765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21750 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g45410.1 LOC_Os11g45410 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Len_g03276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04288 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04775 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g05268 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g07721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17561 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22243 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07380 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07580 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31919 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g32079 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43428 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g48633 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05484 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11891 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32638 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g02438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04435 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16101 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06446 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g06482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06872 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g58117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000158 No alias not classified & original description: CDS=1-2931 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000499 CRR22 EC_2.4 glycosyltransferase & original description: CDS=1-2862 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004580 No alias not classified & original description: CDS=1-2331 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017968 No alias not classified & original description: CDS=1-2673 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020039 No alias not classified & original description: CDS=1-2721 0.08 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.05 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.1 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.09 OrthoFinder output from all 47 species
Spa_g23607 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g42473 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25577 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g27046 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g27180 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 263 309
IPR002885 Pentatricopeptide_repeat 365 410
IPR002885 Pentatricopeptide_repeat 162 208
IPR002885 Pentatricopeptide_repeat 742 767
IPR002885 Pentatricopeptide_repeat 842 866
IPR002885 Pentatricopeptide_repeat 568 598
IPR002885 Pentatricopeptide_repeat 338 360
IPR002885 Pentatricopeptide_repeat 237 259
IPR002885 Pentatricopeptide_repeat 540 562
IPR002885 Pentatricopeptide_repeat 467 497
IPR002885 Pentatricopeptide_repeat 669 699
IPR002885 Pentatricopeptide_repeat 770 800
IPR002885 Pentatricopeptide_repeat 439 465
No external refs found!