AT2G21580


Description : Ribosomal protein S25 family protein


Gene families : OG_01_0001535 (Gene family) Phylogenetic Tree(s): OG0001535_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G21580
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000037.5 No alias 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.11 Gene family
Cre08.g382500 No alias 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.38 Gene family
GSVIVT01000974001 No alias 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.22 Gene family
GSVIVT01010721001 No alias 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.28 Gene family
GSVIVT01023806001 No alias 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.14 Gene family
LOC_Os08g44480 Os08g0559200 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.34 Gene family
LOC_Os09g39540 Os09g0568800 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.32 Gene family
LOC_Os11g05562 Os11g0153800 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.26 Gene family
MA_104137g0010 No alias 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.12 Gene family
MA_10430279g0010 No alias 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.12 Gene family
Smo172404 PACid_15411824 No description available 0.13 Gene family
Solyc02g069850.3.1 Solyc02g069850.3 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.24 Gene family
Solyc10g052660.3.1 Solyc10g052660.3 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.1 Gene family
Zm00001d012598 GRMZM2G139349 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.14 Gene family
Zm00001d031939 GRMZM2G057608 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.29 Gene family
Zm00001d043223 GRMZM5G867518 No description available 0.07 Gene family
Zm00001d049933 GRMZM2G084868 29.2.1.2.1.25 protein.synthesis.ribosomal... 0.38 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 11 105
No external refs found!