AT2G20880


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G20880
Cluster HCCA cluster: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT1G53170 ATERF8, ATERF-8, ERF8 ethylene response factor 8 0.04 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.03 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
Cre14.g620500 No alias No description available 0.02 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01021060001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01021146001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g43820 Os02g0655200 No description available 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os09g39810 Os09g0571700 No description available 0.02 Gene family
LOC_Os09g39850 Os09g0572000 No description available 0.02 Gene family
MA_490022g0010 No alias No description available 0.02 Gene family
MA_502153g0010 No alias No description available 0.02 Gene family
MA_96063g0020 No alias No description available 0.02 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.03 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.04 Gene family
Solyc05g050790.2.1 Solyc05g050790.2 No description available 0.02 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.03 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.04 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.02 Gene family
Zm00001d010175 GRMZM2G457562 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.03 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.02 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005737 cytoplasm IDA Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009651 response to salt stress IEP Arabidopsis.org
BP GO:2000070 regulation of response to water deprivation IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 187 236
No external refs found!