AT2G20420


Description : ATP citrate lyase (ACL) family protein


Gene families : OG_01_0004067 (Gene family) Phylogenetic Tree(s): OG0004067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G20420
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001376.28 No alias No description available 0.01 Gene family
Cre17.g703700 No alias No description available 0.02 Gene family
GSVIVT01028373001 No alias No description available 0.03 Gene family
LOC_Os02g40830 Os02g0621700 No description available 0.14 Gene family
Smo419323 PACid_15408812 No description available 0.05 Gene family
Solyc06g083790.3.1 Solyc06g083790.3 No description available 0.06 Gene family
Zm00001d017258 GRMZM2G064695 No description available 0.08 Gene family
Zm00001d051129 No alias No description available 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0004776 succinate-CoA ligase (GDP-forming) activity ISS Arabidopsis.org
MF GO:0005507 copper ion binding IDA Arabidopsis.org
MF GO:0005524 ATP binding IDA Arabidopsis.org
CC GO:0005739 mitochondrion IDA Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0006094 gluconeogenesis RCA Arabidopsis.org
BP GO:0006096 glycolytic process RCA Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0008152 metabolic process ISS Arabidopsis.org
BP GO:0009651 response to salt stress RCA Arabidopsis.org
BP GO:0009853 photorespiration RCA Arabidopsis.org
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione RCA Arabidopsis.org
BP GO:0046686 response to cadmium ion IEP Arabidopsis.org
BP GO:0046686 response to cadmium ion RCA Arabidopsis.org
BP GO:0051788 response to misfolded protein RCA Arabidopsis.org
BP GO:0080129 proteasome core complex assembly RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013650 ATP-grasp_succ-CoA_synth-type 28 236
IPR005811 CoA_ligase 296 416
No external refs found!