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  5. MA_69152g0010

MA_69152g0010


Description : Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 227.0)


Gene families : OG_01_0001265 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001265_tree ,
OG_02_0000728 (LandPlants) Phylogenetic Tree(s): OG_02_0000728_tree ,
OG_03_0003834 (SeedPlants) Phylogenetic Tree(s): OG_03_0003834_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_69152g0010
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00079500 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g56030,... 0.02 Archaeplastida
Gb_33357 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 Archaeplastida
Smo88008 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.03 Archaeplastida
Gb_33357 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 LandPlants
Smo88008 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.01 LandPlants
Gb_21477 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 281 312
IPR002885 Pentatricopeptide_repeat 394 422
IPR002885 Pentatricopeptide_repeat 432 458
IPR002885 Pentatricopeptide_repeat 80 109
IPR002885 Pentatricopeptide_repeat 463 508
IPR002885 Pentatricopeptide_repeat 147 194
IPR002885 Pentatricopeptide_repeat 216 263
IPR002885 Pentatricopeptide_repeat 321 368
No external refs found!