MA_69152g0010


Description : Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 227.0)


Gene families : OG_01_0001265 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001265_tree ,
OG_02_0000728 (LandPlants) Phylogenetic Tree(s): OG_02_0000728_tree ,
OG_03_0003834 (SeedPlants) Phylogenetic Tree(s): OG_03_0003834_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_69152g0010
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00079500 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g56030,... 0.02 Archaeplastida
Gb_33357 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 Archaeplastida
Smo88008 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.03 Archaeplastida
Gb_33357 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 LandPlants
Smo88008 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.01 LandPlants
Gb_21477 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 281 312
IPR002885 Pentatricopeptide_repeat 394 422
IPR002885 Pentatricopeptide_repeat 432 458
IPR002885 Pentatricopeptide_repeat 80 109
IPR002885 Pentatricopeptide_repeat 463 508
IPR002885 Pentatricopeptide_repeat 147 194
IPR002885 Pentatricopeptide_repeat 216 263
IPR002885 Pentatricopeptide_repeat 321 368
No external refs found!