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  5. AT1G11250

AT1G11250 (SYP125, ATSYP125)


Aliases : SYP125, ATSYP125

Description : syntaxin of plants 125


Gene families : OG_01_0000372 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000372_tree ,
OG_02_0000804 (LandPlants) Phylogenetic Tree(s): OG_02_0000804_tree ,
OG_03_0000894 (SeedPlants) Phylogenetic Tree(s): OG_03_0000894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G11250
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.05 Archaeplastida
GSVIVT01006716001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
GSVIVT01023788001 No alias Syntaxin-112 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030578001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.06 Archaeplastida
GSVIVT01030607001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
Gb_12333 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
LOC_Os02g11890.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
LOC_Os03g57310.1 No alias SYP1-group Qa-type SNARE component 0.05 Archaeplastida
LOC_Os06g39050.1 No alias SYP1-group Qa-type SNARE component 0.12 Archaeplastida
LOC_Os07g07000.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
MA_132768g0010 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
MA_6119g0010 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 Archaeplastida
Pp3c1_23940V3.1 No alias syntaxin of plants 124 0.03 Archaeplastida
Smo74098 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
Smo93442 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Solyc01g006950.3.1 No alias SYP1-group Qa-type SNARE component 0.04 Archaeplastida
Solyc07g052470.3.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Solyc12g005580.2.1 No alias SYP1-group Qa-type SNARE component 0.1 Archaeplastida
Zm00001e011479_P001 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Zm00001e030621_P001 No alias SYP1-group Qa-type SNARE component 0.04 Archaeplastida
Zm00001e032875_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037387_P002 No alias SYP1-group Qa-type SNARE component 0.04 Archaeplastida
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.04 LandPlants
GSVIVT01006716001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 LandPlants
GSVIVT01030578001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.07 LandPlants
LOC_Os03g57310.1 No alias SYP1-group Qa-type SNARE component 0.04 LandPlants
LOC_Os06g39050.1 No alias SYP1-group Qa-type SNARE component 0.11 LandPlants
Pp3c1_23940V3.1 No alias syntaxin of plants 124 0.02 LandPlants
Smo74098 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 LandPlants
Smo93442 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 LandPlants
Solyc01g006950.3.1 No alias SYP1-group Qa-type SNARE component 0.03 LandPlants
Solyc12g005580.2.1 No alias SYP1-group Qa-type SNARE component 0.07 LandPlants
Zm00001e030621_P001 No alias SYP1-group Qa-type SNARE component 0.04 LandPlants
Zm00001e037387_P002 No alias SYP1-group Qa-type SNARE component 0.03 LandPlants
AMTR_s00111p00136390 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.02 SeedPlants
GSVIVT01006716001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 SeedPlants
GSVIVT01030578001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.07 SeedPlants
LOC_Os03g57310.1 No alias SYP1-group Qa-type SNARE component 0.03 SeedPlants
LOC_Os06g39050.1 No alias SYP1-group Qa-type SNARE component 0.1 SeedPlants
Solyc01g006950.3.1 No alias SYP1-group Qa-type SNARE component 0.03 SeedPlants
Solyc12g005580.2.1 No alias SYP1-group Qa-type SNARE component 0.08 SeedPlants
Zm00001e030621_P001 No alias SYP1-group Qa-type SNARE component 0.03 SeedPlants
Zm00001e037387_P002 No alias SYP1-group Qa-type SNARE component 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity TAS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006886 intracellular protein transport TAS Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 28 233
IPR000727 T_SNARE_dom 235 286
No external refs found!