AT2G17790 (ZIP3, VPS35A)


Aliases : ZIP3, VPS35A

Description : VPS35 homolog A


Gene families : OG_01_0002944 (Gene family) Phylogenetic Tree(s): OG0002944_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G17790
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001086.22 No alias 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.02 Gene family
Cre01.g029650 No alias 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.02 Gene family
GSVIVT01009948001 No alias 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.04 Gene family
LOC_Os03g58700 Os03g0801600 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.04 Gene family
Smo167991 PACid_15423127 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.02 Gene family
Solyc02g083560.3.1 Solyc02g083560.3 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.04 Gene family
Solyc03g033400.3.1 Solyc03g033400.3 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.03 Gene family
Zm00001d013059 GRMZM5G844195 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.09 Gene family
Zm00001d034492 GRMZM5G825524 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.11 Gene family

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IGI Arabidopsis.org
BP GO:0006886 intracellular protein transport ISS Arabidopsis.org
BP GO:0042147 retrograde transport, endosome to Golgi ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005378 Vps35 13 747
No external refs found!