AT2G17180


Description : C2H2-like zinc finger protein


Gene families : OG_01_0000035 (Gene family) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G17180
Cluster HCCA cluster: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT3G10470 No alias C2H2-type zinc finger family protein 0.03 Gene family
AT4G35610 No alias zinc finger (C2H2 type) family protein 0.03 Gene family
AT5G04340 CZF2, ZAT6, C2H2 zinc finger of Arabidopsis thaliana 6 0.03 Gene family
LOC_Os02g44120 Os02g0659100 No description available 0.02 Gene family
LOC_Os03g31240 Os03g0425900 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.01 Gene family
LOC_Os04g46670 Os04g0552400 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
MA_26306g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.01 Gene family
Solyc01g090830.2.1 Solyc01g090830.2 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.05 Gene family
Solyc05g050860.1.1 Solyc05g050860.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.06 Gene family
Solyc06g005180.1.1 Solyc06g005180.1 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Zm00001d002732 GRMZM2G132756 No description available 0.05 Gene family
Zm00001d017497 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d026166 GRMZM2G402027 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.05 Gene family
Zm00001d031277 GRMZM2G459540 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d036330 GRMZM2G307402 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Zm00001d038379 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d047298 GRMZM2G372952 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0048235 pollen sperm cell differentiation IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!