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  5. Nbi_g16142

Nbi_g16142


Description : auxin transporter *(PILS) & original description: none


Gene families : OG0000887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16142

Target Alias Description ECC score Gene Family Method Actions
Aev_g11513 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g60230.3 LOC_Os01g60230 auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31478.1 LOC_Os09g31478 auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species
Len_g03803 No alias auxin transporter *(PILS) & original description: none 0.05 OrthoFinder output from all 47 species
MA_50550g0010 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species
Ore_g20250 No alias auxin transporter *(PILS) & original description: none 0.02 OrthoFinder output from all 47 species
Smo115659 No alias Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Solyc02g091240.1.1 Solyc02g091240 auxin efflux transporter (PILS). auxin transporter (PILS) 0.06 OrthoFinder output from all 47 species
Zm00001e034546_P001 Zm00001e034546 auxin efflux transporter (PILS). auxin transporter (PILS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 14 386
No external refs found!