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  5. Nbi_g16045

Nbi_g16045 (POLGAMMA2)


Aliases : POLGAMMA2

Description : DNA polymerase *(POP) & original description: none


Gene families : OG0003071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16045

Target Alias Description ECC score Gene Family Method Actions
AT1G50840 POLGAMMA2 polymerase gamma 2 0.03 OrthoFinder output from all 47 species
Aev_g03409 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12949 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G031600.1 POLGAMMA2,... DNA polymerase *(POP) & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g01959 POLGAMMA1 DNA polymerase *(POP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51546 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g00745 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02364 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13674 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18234 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03974 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013658 POLGAMMA2 DNA polymerase *(POP) & original description: CDS=100-3309 0.03 OrthoFinder output from all 47 species
Spa_g06763 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e041749_P001 POLGAMMA2, Zm00001e041749 DNA polymerase (POP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001098 DNA-dir_DNA_pol_A_palm_dom 857 1039
IPR001098 DNA-dir_DNA_pol_A_palm_dom 707 835
IPR002562 3'-5'_exonuclease_dom 312 486
No external refs found!