1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g15839

Nbi_g15839


Description : not classified & original description: none


Gene families : OG0004696 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0004696_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g15839

Target Alias Description ECC score Gene Family Method Actions
Adi_g010272 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dde_g22368 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Msp_g12623 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Ppi_g53192 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g07311 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g14596 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Spa_g28050 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g54375 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 447 493
IPR002885 Pentatricopeptide_repeat 753 799
IPR002885 Pentatricopeptide_repeat 140 187
IPR002885 Pentatricopeptide_repeat 549 595
IPR002885 Pentatricopeptide_repeat 345 391
IPR002885 Pentatricopeptide_repeat 651 697
IPR002885 Pentatricopeptide_repeat 243 289
IPR002885 Pentatricopeptide_repeat 827 853
IPR002885 Pentatricopeptide_repeat 115 138
IPR002885 Pentatricopeptide_repeat 625 647
No external refs found!