AT2G05840 (PAA2)


Aliases : PAA2

Description : 20S proteasome subunit PAA2


Gene families : OG_01_0004573 (Gene family) Phylogenetic Tree(s): OG0004573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G05840
Cluster HCCA cluster: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001160.15 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
Cre17.g705400 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.06 Gene family
GSVIVT01016731001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.07 Gene family
LOC_Os03g08280 Os03g0180400 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
Solyc12g009140.2.1 Solyc12g009140.2 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
Zm00001d027896 GRMZM2G016511 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
Zm00001d048271 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005839 proteasome core complex TAS Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Arabidopsis.org
MF GO:0008233 peptidase activity ISS Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 35 220
IPR000426 Proteasome_asu_N 9 31
No external refs found!