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  5. Nbi_g15665

Nbi_g15665 (LHCB3*1, LHCB3)


Aliases : LHCB3*1, LHCB3

Description : component *(LHCb1/2/3) of LHC-II complex & original description: none


Gene families : OG0006307 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0006307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g15665
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Aev_g13119 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aev_g32760 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Aop_g21318 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.14 OrthoFinder output from all 39 species
Dac_g14033 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.1 OrthoFinder output from all 39 species
Dac_g38403 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Dcu_g49339 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Dde_g29238 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 39 species
Len_g56584 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.06 OrthoFinder output from all 39 species
Msp_g08155 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.11 OrthoFinder output from all 39 species
Ore_g31051 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Ore_g39671 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Ore_g41462 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Pir_g12400 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.07 OrthoFinder output from all 39 species
Ppi_g39667 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.06 OrthoFinder output from all 39 species
Spa_g17778 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.1 OrthoFinder output from all 39 species
Spa_g29645 LHCB3*1, LHCB3 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Spa_g56296 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.06 OrthoFinder output from all 39 species
Spa_g56297 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.08 OrthoFinder output from all 39 species
Tin_g04406 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.13 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 60 227
No external refs found!